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ctfapplyk

by Admin last modified 2008-10-30 08:21

derived from CTFPLOT giving automatic application of C.T.F. to phases input from MMBOX and output ready for ORIGTILT. PROGRAM PLOTS SPOTS FROM MMBOX IN RECIPROCAL SPACE AND C.T.F. PLOT OF IMAGE.

C  CTFAPPLY : derived from CTFPLOT giving automatic application of C.T.F. to
C             phases input from MMBOX and output ready for ORIGTILT.
C  PROGRAM PLOTS SPOTS FROM MMBOX IN RECIPROCAL SPACE AND C.T.F. PLOT OF IMAGE.
C
C       V1.01   20.4.87         RH      changed to allow IQMAX = 9 to be passed.
C       V1.02   24.1.89         RH      plots box sizes proportional to 8.1-IQ.
C       V1.03   13.6.90         RH      Minor change to FORMAT statement 105.
C       V1.04   6.10.92         RH      extended o/p format h,k,A,P,IQ,BCK,CTF
C       V1.05   21.5.93         RH      compatible with Alliant - CCPDPN.
C       V1.06   14.4.95         RH      minor change to I/P FORMAT statement 99
C       V2.00   13.8.00         TSH     major change from plot82 to plot2k
C         "     13.6.01         TSH     P2K_FONT needed string terminator
C       V3.00   01.2.97         HS      PHACON,RESMAX, ps-file completed.
C       V3.01   02.2.98         HS      RESHIG,RESLOW
C               remember to change version number and date in title record.
C
C  INPUT PARAMETERS
C      CARD 1    AX AY BX BY ISIZE DSTEP XMAG
C      CARD 2    DFMID1 DFMID2 ANGAST CS KV RESMAX
C      CARD 3    ISER TITLE
C      CARD 4    PHACON
C      CARD 5    RESHIG,RESLOW
C
C         AX,AY   - LATTICE PARAMETERS (FROM NNBOX) OF (1,0) AND (0,1)
C         BX,BY   -                                     IN GRID UNITS.
C         ISIZE   - SIZE OF DENSITOMETERED ARRAY (E.G. 2048)
C         DSTEP   - DENSITOMETER STEPSIZE IN MICRONS
C         XMAG    - PRECISE MAGNIFICATION NORMALLY WORKED OUT FROM LATTICE
C                    PARAMETERS AND KNOWN CELL DIMENSIONS.
C         DFMID1  - DEFOCUS LEVEL (UNDERFOCUS +VE). IF DFMID2=DFMID1, IMAGE
C         DFMID2  -  IS NON-ASTIGMATIC. OTHERWISE AMOUNT OF DEFOCUS IN TWO
C                    ORTHOGONAL DIRECTIONS, DFMID1 BEING DEFOCUS IN DIRECTION
C                    ANGAST (DEGS) RELATIVE TO X AND Y OF THE FOURIER TRANSFORM
C         CS      - SPHERICAL ABERRATION IN MM.
C         KV      - E.M. ACCELERATING VOLTAGE
C         ISER    - SERIAL NUMBER AT HEAD OF OUTPUT FILE.
C         TITLE   - TITLE FOR OUTPUT FILE.
C         RESMAX  - Maximum resolution for output ps-file.
C         PHACON  - PHASECONTRAST, should be approx. 0.93(Cryo),0.65(neg.stain)
C         RESHIG  - HIGHER VALUE FOR RESOLUTION CUTOFF (JUST ON OUTPUT)
C         RESLOW  - LOWER  VALUE FOR RESOLUTION CUTOFF (JUST ON OUTPUT)
C
C   INPUT  DATASTREAM  'IN'
C   OUTPUT DATASTREAM  'OUT'

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